lapa
latest
Feature Overview:
Quick Start
LAPA
Running LAPA with CLI and python
CLI arguments
Output format
Quality Control (QC)
Statistical testing
API Reference
lapa
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Welcome to lapa’s documentation!
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Welcome to lapa’s documentation!
Feature Overview:
Quick Start
LAPA
Installation
Poly(A) site calling from long-read RNA-seq or 3’-seq
TSS calling from long-read RNA-seq
Documentation
Cite
Running LAPA with CLI and python
Poly(A) cluster calling
TSS cluster calling
Linking reads
Correction of TALON gtf and abundance
CLI arguments
lapa
lapa_tss
lapa_link_tss_to_tes
lapa_correct_talon
Output format
Poly(A) clusters
TSS clusters
Quality Control (QC)
Statistical testing
Fisher’s exact test
BetaBinomial test
API Reference
lapa
Indices and tables
Index
Read the Docs
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tss_clustering
Downloads
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